The detailed information of tRNA gene sequence


Sequence ID>WENV170653728
Genome IDJRYJ01060194
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 465
End posion on genome 541
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ccagtttttT
tRNA gene sequence 
GGCGCGTTGGTGTAACTGGTTAACACGCCGCCCTCTCAAGGCGGAGAGCACGGGTTCGAG
TCCCGTACGCGCTATCg
Downstream region at tRNA end position 
aaaagcagaa
Secondary structure (Cloverleaf model)
>WENV170653728	Glu	CTC
                   T      ATCg aaaagcagaa
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T G
                    T     T G C C C     A
      C A A        G      | | | | |     G
    T       T G T G       A C G G G     C
    G       | | | |                 T T
    G       A C A C
      T T A        G     AGAGC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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