The detailed information of tRNA gene sequence


Sequence ID>WENV170653746
Genome IDJRYJ01072048
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 378
End posion on genome 289
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tccgtcgtac
tRNA gene sequence 
GGAGAGGTCGCATAGTCTGGTCTAGTGCGCACGATTGGAAATCGTGTACCTCGCAAGGGG
TCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gggtcaaatt
Secondary structure (Cloverleaf model)
>WENV170653746	Ser	GGA
                   c      GCCA gggtcaaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C T G A        C      | | | | |     G
  T         T A C G       G C G G G     C
  G         + | | |                 T T
  G         G T G C
    T C T A        G     TACCTCGCAAGGGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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