The detailed information of tRNA gene sequence


Sequence ID>WENV170653758
Genome IDJRYJ01079016
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 165
End posion on genome 75
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgctgtcccc
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCTTAAGGAGCGCGCTTGGAAAGCGCGTGGGCGTTCATAGCGC
CTCGTGGGTTCGAATCCCACCCTCTCCGCCT
Downstream region at tRNA end position 
cacgccggct
Secondary structure (Cloverleaf model)
>WENV170653758	Ser	GGA
                   c      GCCT cacgccggct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    C       A G G A
      T T A        G     TGGGCGTTCATAGCGCCTC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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