The detailed information of tRNA gene sequence


Sequence ID>WENV170653770
Genome IDJRYJ01086218
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 347
End posion on genome 419
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
caggcattgc
tRNA gene sequence 
GGGGCAGTCGTCTAACCGGTCAGGACGCCAGACTTTCAATTTGGTAATGCGGGTTCGAGT
CCCGTCCGCCCTCatt
Downstream region at tRNA end position 
cgtcctcctg
Secondary structure (Cloverleaf model)
>WENV170653770	Glu	TTC
                   c      Catt cgtcctcctg
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     A   C
                     G - C          T G
                    T     T G C C C     A
      C A A        C      + | | | |     G
    C       T C T G       G C G G G     C
    G       + | | |                 T T
    G       G G A C
      T C A        G     TAAT
                    C - G
                    C - G
                    A - T
                    G + T
                    A - T
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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