The detailed information of tRNA gene sequence


Sequence ID>WENV170653807
Genome IDJRYJ01116288
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 132
End posion on genome 61
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cgcggaactt
tRNA gene sequence 
GGCTGAGTAGCATAAATGGCATTGTTGTTGTTTGCAAAACAATAGGTGTGGGTTCGATTC
CCACCTCAGCTTggg
Downstream region at tRNA end position 
agtagtttaa
Secondary structure (Cloverleaf model)
>WENV170653807	Cys	GCA
                   t      Tggg agtagtttaa
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C          T T
                    T     C A C C C     A
      A A A        A      | | | | |     G
    T       T A C G       G T G G G     C
    G         | | +                 T T
    G       T T G T
      C A          T     AGGT
                    G + T
                    T - A
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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