The detailed information of tRNA gene sequence


Sequence ID>WENV170653808
Genome IDJRYJ01116794
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 53
End posion on genome 140
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cagcaaatcc
tRNA gene sequence 
GGAAGGGTGGCAGAGTGGTCTATAGCGGCGGTCTTGAAAACCGCTGAGCCGCAAGGCTCC
GGGGGTTCGAATCCCTCCCCTTCCGCCA
Downstream region at tRNA end position 
ccgcaagcaa
Secondary structure (Cloverleaf model)
>WENV170653808	Ser	TGA
                   c      GCCA ccgcaagcaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       +   | |                 T T
    T       T A G C
      C T A        G     TGAGCCGCAAGGCTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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