The detailed information of tRNA gene sequence


Sequence ID>WENV170653809
Genome IDJRYJ01117253
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 78
End posion on genome 164
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tgacgacgcc
tRNA gene sequence 
GCCGGGGTGGCGGAACCGGAATACGCGGCCGGCTTAAACCCGGCTGCCCGAGAGGGCTTG
AGGGTTCGAATCCCTCTCCGGGTACCA
Downstream region at tRNA end position 
agcgttccct
Secondary structure (Cloverleaf model)
>WENV170653809	Leu	TAA
                   c      ACCA agcgttccct
                     G + T
                     C - G
                     C - G
                     G   G
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C A A        G      | | | | |     G
    C       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      A A T        G     TGCCCGAGAGGGCTT
                    G - C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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