The detailed information of tRNA gene sequence


Sequence ID>WENV170653819
Genome IDJRYJ01124553
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 245
End posion on genome 151
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
caatcgccga
tRNA gene sequence 
GGAAGCTAATCTTGGCCGGTGCTGGGCCTGGTCTTCAAAACCAGCGTGCGGCATTCTATG
TCGCGGGTGGGTTCGACTCCCACTAGCTTCCGCCA
Downstream region at tRNA end position 
tctccctttc
Secondary structure (Cloverleaf model)
>WENV170653819	SeC(p)	TCA
                   a      GCCA tctccctttc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     T - A
                     A - T          T C
                    A     C A C C C     A
      C C G        T      | | | | |     G
    G       G T T C       G T G G G     C
    G       + + + |                 T T
    T       T G G G
      G C          C     CGTGCGGCATTCTATGTCGCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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