The detailed information of tRNA gene sequence


Sequence ID>WENV170653826
Genome IDJRYJ01129106
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 368
End posion on genome 292
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttgaaaactT
tRNA gene sequence 
GGGGTCGTAGCCGAATTGGAAAGGCGCCAGTCTTGCAAACTGGAAATTGTGGGTTCGAGT
CCCACCGATTCCATCA
Downstream region at tRNA end position 
actgtttttt
Secondary structure (Cloverleaf model)
>WENV170653826	Ala	TGC
                   T      ATCA actgtttttt
                     G - C
                     G - C
                     G + T
                     G + T
                     T - A
                     C - G
                     G - C          T G
                    T     C A C C C     A
      T A A        A      | | | | |     G
    T       G C C G       G T G G G     C
    G         | | |                 T T
    G       A G G C
      A A          G     AAATT
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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