The detailed information of tRNA gene sequence


Sequence ID>WENV170653830
Genome IDJRYJ01130449
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 245
End posion on genome 171
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttccaactgt
tRNA gene sequence 
GGCGCTATCGTCTAAGGGTTAGGACAAGGCCCTCTCAAGGCTTAAATACGGGTTCGAATC
CCGTTAGCGCTACCA
Downstream region at tRNA end position 
cgctttcaaa
Secondary structure (Cloverleaf model)
>WENV170653830	Glu	CTC
                   t      ACCA cgctttcaaa
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     T G C C C     A
      G A A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AAAT
                    A - T
                    G + T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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