The detailed information of tRNA gene sequence


Sequence ID>WENV170653862
Genome IDJRYJ01165817
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 399
End posion on genome 326
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGGCTGTAGCTCTGTTGGAAGAGCACCTCGATGGCATCGAGGGGGTCGTCGGTTCGAGT
CCGTCCAGCTCCACtg
Downstream region at tRNA end position 
agaatcggca
Secondary structure (Cloverleaf model)
>WENV170653862	Ala	GGC
                   n      ACtg agaatcggca
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     C T G C C     A
      T G T        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      A A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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