The detailed information of tRNA gene sequence


Sequence ID>WENV170653909
Genome IDJRYK01000377
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 10018
End posion on genome 10092
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
cagcccggaa
tRNA gene sequence 
GCCGACGTAGCTCAGTGGTAGAGCAGCTCACTCGTAATGAGCAGGTCGGAGGTTCAAATC
CTCTCGTCGGCTCCA
Downstream region at tRNA end position 
attatatcaa
Secondary structure (Cloverleaf model)
>WENV170653909	Thr	CGT
                   a      TCCA attatatcaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
        G A        A      + | | | |     A
      T     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    G - C
                    C - G
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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