The detailed information of tRNA gene sequence


Sequence ID>WENV170653928
Genome IDJRYK01000631
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 677
End posion on genome 752
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccccttccct
tRNA gene sequence 
GGCGAGTTAGCTCAGCGGTTAGAGCAGCGGAATCATAATCCGTTGGTCCGGGGTTCAAAT
CCCTGACTCGCCACCA
Downstream region at tRNA end position 
tttttctcgc
Secondary structure (Cloverleaf model)
>WENV170653928	Met	CAT
                   t      ACCA tttttctcgc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     G T C C C     A
      C G A        A      | + | | |     A
    G       C T C G       C G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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