The detailed information of tRNA gene sequence


Sequence ID>WENV170654055
Genome IDJRYK01005654
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 8690
End posion on genome 8615
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tccgaggaaa
tRNA gene sequence 
GGGTGCTTAGCTCAGCCGGTAGAGCGTCGCCCTTACAAGGCGAATGTCGGCGGTTCGATC
CCGTCAGCACCCACCA
Downstream region at tRNA end position 
nngcgggttc
Secondary structure (Cloverleaf model)
>WENV170654055	Val	TAC
                   a      ACCA nngcgggttc
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     T - A          C T
                    T     C T G C C     A
      C G A        A      | + | | |     G
    C       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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