The detailed information of tRNA gene sequence


Sequence ID>WENV170654072
Genome IDJRYK01006821
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 3864
End posion on genome 3940
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tccgtgacgt
tRNA gene sequence 
GGGCGCGTAGCTCAGTTGGTTAGAGCGCACGGTTCACATCCGTGAGGTCAGGGGTTCAAG
TCCCTTCGCGCCCACCT
Downstream region at tRNA end position 
tcgtcatctt
Secondary structure (Cloverleaf model)
>WENV170654072	Val	CAC
                   t      ACCT tcgtcatctt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T G
                    T     T T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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