The detailed information of tRNA gene sequence


Sequence ID>WENV170654074
Genome IDJRYK01006893
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 954
End posion on genome 1028
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcactgcat
tRNA gene sequence 
GGCGACGTAGCTCAGGGGCAGAGCAGGGCTCTCATAAGGCCCGTGTCGGTGGTTCGATTC
CACCCGTCGCCACCA
Downstream region at tRNA end position 
aaaaaatctc
Secondary structure (Cloverleaf model)
>WENV170654074	Met	CAT
                   t      ACCA aaaaaatctc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T T
                    T     C C A C C     A
        G A        A      | | | | |     G
      G     C T C G       G G T G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     GTGTC
                    G - C
                    G - C
                    G - C
                    C - G
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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