The detailed information of tRNA gene sequence


Sequence ID>WENV170654272
Genome IDJRYK01052829
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 513
End posion on genome 589
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttggttccat
tRNA gene sequence 
CGGGGTGTAGCTCAGCCTGGTAGAGTACTGCGTTCGGGACGCAGGAGTCGGAGGTTCAAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
atnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170654272	Pro	CGG
                   t      ACCA atnnnnnnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    C       C T C G       G G A G G     C
    T       | | | +                 T T
    G       G A G T
      G T A        A     GAGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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