The detailed information of tRNA gene sequence


Sequence ID>WENV170654279
Genome IDJRYK01059043
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 36
End posion on genome 122
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcaattgcct
tRNA gene sequence 
GGAGAGGTCGCCTAGTCCGGCTTATGGCGCGGGCCTGGAAAGCTCGTGAACGATGAGTTC
CGTGAGTTCAAATCTCACCCTCTCCGCtg
Downstream region at tRNA end position 
gtgtcagtgg
Secondary structure (Cloverleaf model)
>WENV170654279	Ser	GGA
                   t      GCtg gtgtcagtgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C T C     A
    C T G A        C      | | | | |     A
  C         T C C G       G T G A G     C
  G           | | |                 T T
  G         T G G C
    C T T A        G     TGAACGATGAGTTCC
                    C - G
                    G - C
                    G + T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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