The detailed information of tRNA gene sequence


Sequence ID>WENV170654300
Genome IDJRYK01070818
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 114
End posion on genome 189
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tgttttcgtc
tRNA gene sequence 
GCCCACGTAGCTCAGTCGGCAGAGCACATCCTTGGTAAGGATGAGGTCAGCGGTTCAAGT
CCGCTCGTGGGCTCCA
Downstream region at tRNA end position 
tacgcagcat
Secondary structure (Cloverleaf model)
>WENV170654300	Thr	GGT
                   c      TCCA tacgcagcat
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          T G
                    T     T C G C C     A
      T G A        A      | | | | |     A
    C       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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