The detailed information of tRNA gene sequence


Sequence ID>WENV170654302
Genome IDJRYK01072513
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 679
End posion on genome 606
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
annttgaacg
tRNA gene sequence 
GGGCCTTTAGCTCAATGGTTAGAGCACGCGGCTCATAACCGCTTGGTTGCGGGTTCGAAT
CCTGCAAGGCCCACtt
Downstream region at tRNA end position 
ctgaatataa
Secondary structure (Cloverleaf model)
>WENV170654302	Met	CAT
                   g      ACtt ctgaatataa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T A
                    T     C G T C C     A
      T A A        A      | | + | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTT
                    C   T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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