The detailed information of tRNA gene sequence


Sequence ID>WENV170654361
Genome IDJRYK01108612
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 396
End posion on genome 320
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcagcaccgc
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCGGGTTCGAA
TCCCGCCCCCGCTACCT
Downstream region at tRNA end position 
cacgaaaggc
Secondary structure (Cloverleaf model)
>WENV170654361	Met	CAT
                   c      ACCT cacgaaaggc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    C       C G A G       G C G G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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