The detailed information of tRNA gene sequence


Sequence ID>WENV170654376
Genome IDJRYK01121692
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 97
End posion on genome 22
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cacgctcgat
tRNA gene sequence 
GGGCCTGTAGCACAACGGTTAGTGCAGGGGACTCATAATCCCTTGGTTGCAGGTTCGAAT
CCTGCCAGGCCCACCA
Downstream region at tRNA end position 
attctttctg
Secondary structure (Cloverleaf model)
>WENV170654376	Met	CAT
                   t      ACCA attctttctg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C G T C C     A
      C A A        A      | | | | |     G
    G       C A C G       G C A G G     C
    G       | | | |                 T T
    T       G T G C
      T A          A     TGGTT
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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