The detailed information of tRNA gene sequence


Sequence ID>WENV170654377
Genome IDJRYK01122836
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 128
End posion on genome 52
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcgggcatgc
tRNA gene sequence 
GCGGGTGTAGCTCAGTCGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCACTCGCGCCA
Downstream region at tRNA end position 
tcccgtcccg
Secondary structure (Cloverleaf model)
>WENV170654377	Asp	GTC
                   c      GCCA tcccgtcccg
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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