The detailed information of tRNA gene sequence


Sequence ID>WENV170654384
Genome IDJRYK01127223
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 252
End posion on genome 180
Amino Acid Thr
Anticodon AGT
Upstream region at tRNA start position 
cattttcatc
tRNA gene sequence 
GGCCTCTTAGCACAGCGGTAGTTGCGATTCCCTAGTAAGGAATAGGTCACGAGTTCGATC
CTCGTAGGGGCCTtgt
Downstream region at tRNA end position 
ttttttcttt
Secondary structure (Cloverleaf model)
>WENV170654384	Thr	AGT
                   c      Ttgt ttttttcttt
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     T - A          C T
                    T     T G C T C     A
      C G A        A      | | | | |     G
    G       C A C G       A C G A G     C
    G         | | |                 T T
    T       T T G C
      A G          G     AGGTC
                    A - T
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    A G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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