The detailed information of tRNA gene sequence


Sequence ID>WENV170654385
Genome IDJRYK01133776
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 831
End posion on genome 742
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgaagttctt
tRNA gene sequence 
GGAGGCGTGGCTGAGTGGTCGAAAGCGACGGTCTTGAAAACCGTTAGACCTGCAAGGGTC
TCAGAGGTTCGAATCCTCTCGCCTCCGCCA
Downstream region at tRNA end position 
aatggttctt
Secondary structure (Cloverleaf model)
>WENV170654385	Ser	TGA
                   t      GCCA aatggttctt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        G      | | | | |     G
    G       G T C G       A G A G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAGACCTGCAAGGGTCTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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