The detailed information of tRNA gene sequence


Sequence ID>WENV170654412
Genome IDJRYK01155245
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 217
End posion on genome 293
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tctaagaatt
tRNA gene sequence 
GGCCCCATCGTCTAGCGGCCTAGGATATCTGGTTCTCATCCAGAAGATCGGGGGTTCGAA
TCCCCATGGGGTCACAA
Downstream region at tRNA end position 
aattgcattc
Secondary structure (Cloverleaf model)
>WENV170654412	Glu	CTC
                   t      ACAA aattgcattc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     A C C C C     A
      C G A        C        | | | |     G
    G       T C T G       G G G G G     C
    G       + | | +                 T T
    C       G G A T
      C T A        A     AGATC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       T
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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