The detailed information of tRNA gene sequence


Sequence ID>WENV170654419
Genome IDJRYK01160411
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 338
End posion on genome 423
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
acgacgtcag
tRNA gene sequence 
GGCCCCTTGGCGGAATGGCATACGCAGGAGATTTAAAATCTCTGGCTCGGAAGAGCGTCT
CGGTTCGAGTCCGAGAGGGGCTACCA
Downstream region at tRNA end position 
cgtaaatgcc
Secondary structure (Cloverleaf model)
>WENV170654419	Leu	TAA
                   g      ACCA cgtaaatgcc
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     G A G C C     A
      T A A        G      | | | | |     G
    G       G G C G       C T C G G     C
    G         | | |                 T T
    C       A C G C
      A T          A     GGCTCGGAAGAGCGT
                    G + T
                    G - C
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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