The detailed information of tRNA gene sequence


Sequence ID>WENV170654447
Genome IDJRYK01188254
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 132
End posion on genome 57
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttgcgcaaac
tRNA gene sequence 
GCTCCCATCGTCTAGAGGTCTAGGACATTGCCCTCTCAAGGCAGTAACCGGGGTTCGAAT
CCCCGTGGGAGCGCCA
Downstream region at tRNA end position 
tctcgtacac
Secondary structure (Cloverleaf model)
>WENV170654447	Glu	CTC
                   c      GCCA tctcgtacac
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        A     TAAC
                    T + G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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