The detailed information of tRNA gene sequence


Sequence ID>WENV170654458
Genome IDJRYK01200849
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 367
End posion on genome 454
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atgatgctgc
tRNA gene sequence 
GGAGAGTTGGCCGAGTGGTCGAAGGCGCACCCCTGCTAAGTGTGTTTGGATCAAAAGTCC
ATCGAGTGTTCGAATCCCTCACTCTCCGnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170654458	Ser	GCT
                   c      Gnnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | |   |     G
    G       G C C G       G A G T G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TTTGGATCAAAAGTCCATC
                    C - G
                    A - T
                    C - G
                    C   T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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