The detailed information of tRNA gene sequence


Sequence ID>WENV170654911
Genome IDJRYL01080051
Search identical group
Phylum/Class[JRYL] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater from different
Species
Start position on genome 395
End posion on genome 305
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgtgcagtga
tRNA gene sequence 
GGAGAGATGGCTGAGCTGGTCTAAGGCGCACGACTGGAAATCGTGTGAGGCTTTATCGCC
TCCGAGAGTTCGAATCTCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aaaattgacc
Secondary structure (Cloverleaf model)
>WENV170654911	Ser	GGA
                   a      GCCA aaaattgacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C T C     A
    T C G A        G      | | | | |     G
  G         G T C G       G A G A G     C
  G           + | |                 T T
  T         A G G C
    C T A          G     TGAGGCTTTATCGCCTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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