The detailed information of tRNA gene sequence


Sequence ID>WENV170654941
Genome IDJRYL01108742
Search identical group
Phylum/Class[JRYL] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater from different
Species
Start position on genome 257
End posion on genome 352
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cgggaacaag
tRNA gene sequence 
GGAAGAGAAGCGTCCCCGGTGGGGCGGCCGGACTTCAAATCCGGTTGGGGCAGCGAGCCT
GTCTCGGGTGGGTTCGACTCCCACTCTCTTCCGCCA
Downstream region at tRNA end position 
gatgcgacga
Secondary structure (Cloverleaf model)
>WENV170654941	SeC(p)	TCA
                   g      GCCA gatgcgacga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    A     C A C C C     A
      C C C        G      | | | | |     G
    G       C T G C       G T G G G     C
    G       | + | |                 T T
    T       G G C G
      G G          G     TTGGGGCAGCGAGCCTGTCTCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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