The detailed information of tRNA gene sequence


Sequence ID>WENV170655013
Genome IDJTFN01001742
Search identical group
Phylum/Class[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
Species
Start position on genome 3947
End posion on genome 3859
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaccgttttt
tRNA gene sequence 
GGAGCGATGACCGAGTGGCCGAAGGTGGCTCCCTGCTAAGGAGTTATACCCTATCCGGGT
ATCGGGGGTTCGAATCCCCCTTGCTCCGCat
Downstream region at tRNA end position 
tgactcatta
Secondary structure (Cloverleaf model)
>WENV170655013	Ser	GCT
                   t      GCat tgactcatta
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G + T
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G G G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATACCCTATCCGGGTATC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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