The detailed information of tRNA gene sequence


Sequence ID>WENV170655015
Genome IDJTFN01001742
Search identical group
Phylum/Class[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
Species
Start position on genome 3559
End posion on genome 3473
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgtaggtttT
tRNA gene sequence 
GGAGAGATGTCCGAGTGGTCGATGGTGCAGTCTTGGAAAGGCTGTGTGCGGTAACGTACC
ACGGGTTCGAATCCCGTTCTCTCCGTat
Downstream region at tRNA end position 
tgcctaggtg
Secondary structure (Cloverleaf model)
>WENV170655015	Ser	GGA
                   T      GTat tgcctaggtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T G C C C     A
      T G A        G      | | | | |     G
    G       G C C T       A C G G G     C
    G       + | |                   T T
    T       T G G T
      C G A        G     TGTGCGGTAACGTACC
                    C - G
                    A - T
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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