The detailed information of tRNA gene sequence


Sequence ID>VRL0100001
Genome IDAB011501
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesParamecium bursaria Chlorella virus CVK2
Start position on genome 108
End posion on genome 180
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
aaacgcaaca
tRNA gene sequence 
GTTCGCTTAGCTCAGTGGTTAGAGCATTGGTCTTATGAGCCAAGGGTCACCGGTTCGATC
CCGGTAGCGAACAaag
Downstream region at tRNA end position 
tcggcggact
Secondary structure (Cloverleaf model)
>VRL0100001	Ile	TAT
                   a      Aaag tcggcggact
                     G - C
                     T - A
                     T - A
                     C - G
                     G - C
                     C - G
                     T - A          C T
                    T     T G G C C     A
      T G A        A      | | | | |     G
    G       C T C G       A C C G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     GGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    T + G
                  C       A
                  T       G
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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