The detailed information of tRNA gene sequence


Sequence ID>WENV170655448
Genome IDJTFN01033506
Search identical group
Phylum/Class[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
Species
Start position on genome 260
End posion on genome 349
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taaaaaataa
tRNA gene sequence 
GGAAGGGTGGCAGAGCACGGTTTATTGCAGCGGTCTTGAAAACCGCCGAACCGCAAGGTT
CCGAGAGTTCAAATCTCTCTCCTTCCTCCA
Downstream region at tRNA end position 
tttttgaact
Secondary structure (Cloverleaf model)
>WENV170655448	Ser	TGA
                   a      TCCA tttttgaact
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G + T          T A
                    T     C T C T C     A
    A C G A        G      | | | | |     A
  C         G A C G       G A G A G     C
  G         + | | |                 T T
  G         T T G C
    T T T A        A     CGAACCGCAAGGTTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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