The detailed information of tRNA gene sequence


Sequence ID>WENV170655559
Genome IDJTFN01045396
Search identical group
Phylum/Class[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
Species
Start position on genome 10
End posion on genome 99
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ncgcgccacc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAACGCGTGTAGGCGGGAAACCGTC
TCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
cttttttggc
Secondary structure (Cloverleaf model)
>WENV170655559	Ser	GGA
                   c      GCCA cttttttggc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGAAACCGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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