The detailed information of tRNA gene sequence


Sequence ID>WENV170655880
Genome IDJTFN01090113
Search identical group
Phylum/Class[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
Species
Start position on genome 544
End posion on genome 467
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctccgcacgc
tRNA gene sequence 
AGGTCTGTAGCTCGAACTGGTTAGAGCACCGCACTCCAAATGCGGGGGTTGAGGGTTCGA
ATCCTTCCAGGCCTGCCA
Downstream region at tRNA end position 
tttttgtttt
Secondary structure (Cloverleaf model)
>WENV170655880	Trp	CCA
                   c      GCCA tttttgtttt
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     T - A
                     G - C          T A
                    T     C T T C C     A
    C A A G        A      | | + | |     G
  T         C T C G       G A G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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