The detailed information of tRNA gene sequence


Sequence ID>WENV170656068
Genome IDJTFN01125341
Search identical group
Phylum/Class[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
Species
Start position on genome 112
End posion on genome 22
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgcttccac
tRNA gene sequence 
GGAGAGGTGGATGAGTGGTTTAAGTCGCACGCCTGGAAAGCGTGTTCAGGGTAATACCCT
GACGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gaatatgtag
Secondary structure (Cloverleaf model)
>WENV170656068	Ser	GGA
                   c      GCCA gaatatgtag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TTCAGGGTAATACCCTGAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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