The detailed information of tRNA gene sequence


Sequence ID>WENV170656107
Genome IDJTFO01000068
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 1044
End posion on genome 1119
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atatacattT
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCAACGGACTCATAACCCGTCGGTCCTTAGTTCAAG
TCTAAGTGGGCCCAAaa
Downstream region at tRNA end position 
agcagatttc
Secondary structure (Cloverleaf model)
>WENV170656107	Met	CAT
                   T      AAaa agcagatttc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G A A T C     A
      T G A        A      | | | | |     A
    T       C T C G       C T T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A   C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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