The detailed information of tRNA gene sequence


Sequence ID>WENV170656191
Genome IDJTFO01003510
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 249
End posion on genome 159
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgccacttct
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGCTAACCGCGT
ATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gatacaaaac
Secondary structure (Cloverleaf model)
>WENV170656191	Ser	GGA
                   t      GCCA gatacaaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TATACGCTAACCGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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