The detailed information of tRNA gene sequence


Sequence ID>WENV170656205
Genome IDJTFO01004325
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 2551
End posion on genome 2462
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGATGATTGGTAGAGTGGTCAAATACGTCTCACTGCTAATGAGAAGCTGTTTTAAACGGC
ACATAGGTTCAAATCCTATATCATCCGCCA
Downstream region at tRNA end position 
aagttgtttt
Secondary structure (Cloverleaf model)
>WENV170656205	Ser	GCT
                   n      GCCA aagttgtttt
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     A - T
                     T - A          T A
                    T     T A T C C     A
      T G A        G      | | | | |     A
    G       G A T G       A T A G G     C
    G         | | |                 T T
    T       A T A C
      C A A        G     AGCTGTTTTAAACGGCAC
                    T - A
                    C - G
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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