The detailed information of tRNA gene sequence


Sequence ID>WENV170656208
Genome IDJTFO01004519
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 327
End posion on genome 237
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctatactcat
tRNA gene sequence 
GGAGAGATGGTCGAGTTGGTTTAAGGCACCGGTCTTGAAAACCGGCGTACCTTTACGGGT
ACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tcagtatagc
Secondary structure (Cloverleaf model)
>WENV170656208	Ser	TGA
                   t      GCCA tcagtatagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C T G       G A G G G     C
  G           | + |                 T T
  T         A G G C
    T T A          A     CGTACCTTTACGGGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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