The detailed information of tRNA gene sequence


Sequence ID>WENV170656255
Genome IDJTFO01007258
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 5440
End posion on genome 5527
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctctttttat
tRNA gene sequence 
GGACAGCTGGCCGAGTGGTCGAAGGCGCTCGCCTGGAACGCGGGTATAGGGCAACCTATC
TAGGGTTCGAATCCCTAGCTGTCCACCA
Downstream region at tRNA end position 
cattatcttg
Secondary structure (Cloverleaf model)
>WENV170656255	Ser	GGA
                   t      ACCA cattatcttg
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     C - G          T A
                    T     A T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       T A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATAGGGCAACCTATC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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