The detailed information of tRNA gene sequence


Sequence ID>WENV170656257
Genome IDJTFO01007359
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 1168
End posion on genome 1076
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caagacaagc
tRNA gene sequence 
GGTGAGGTGGCCGAGAGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATAGGGTTTGTAGCT
CTATCGAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
ttttgtgaaa
Secondary structure (Cloverleaf model)
>WENV170656257	Ser	GCT
                   c      GCCA ttttgtgaaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGGTTTGTAGCTCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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