The detailed information of tRNA gene sequence


Sequence ID>WENV170656269
Genome IDJTFO01007579
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 625
End posion on genome 549
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnttggtctt
tRNA gene sequence 
CGGGAAGTGGCGCAGCTTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCAGGTTCAAA
TCCTGTCTTCCCGACCA
Downstream region at tRNA end position 
ataaaaacaa
Secondary structure (Cloverleaf model)
>WENV170656269	Pro	TGG
                   t      ACCA ataaaaacaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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