The detailed information of tRNA gene sequence


Sequence ID>WENV170656271
Genome IDJTFO01007814
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 2097
End posion on genome 2187
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaacaagta
tRNA gene sequence 
GGACAGGTGGCCGAGTGGTTGAAGGCGCACGCCTGGAAAGCGTGTATACGTTTATAGCGT
ATCGGGGGTTCGAATCCCCCTCTGTCCGCCA
Downstream region at tRNA end position 
gaattcaaaa
Secondary structure (Cloverleaf model)
>WENV170656271	Ser	GGA
                   a      GCCA gaattcaaaa
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGTTTATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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