The detailed information of tRNA gene sequence


Sequence ID>WENV170656272
Genome IDJTFO01007895
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 1181
End posion on genome 1094
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atagcctttt
tRNA gene sequence 
GGAGGGTTGACCGAGCGGTCGAAGGTGGCGGTCTTGAAAACCGTTGAGGCGCAAGCTTCC
GTGAGTTCGAATCTCACACCCTCCGCCA
Downstream region at tRNA end position 
atagatattt
Secondary structure (Cloverleaf model)
>WENV170656272	Ser	TGA
                   t      GCCA atagatattt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G C C A       G T G A G     C
    G         | | |                 T T
    T       A G G T
      C G A        G     TGAGGCGCAAGCTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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