The detailed information of tRNA gene sequence


Sequence ID>WENV170656331
Genome IDJTFO01010250
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 1309
End posion on genome 1220
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccagccaaat
tRNA gene sequence 
AGGTTGATAGCTCTAACGGCAGAGCAACGGTCTCCAAAACCGAAGGCCCTCATAAGGTAT
ATAAAGGTTCAAATCCTTTTCAATCTGCCA
Downstream region at tRNA end position 
gtatttttaa
Secondary structure (Cloverleaf model)
>WENV170656331	Trp	CCA
                   t      GCCA gtatttttaa
                     A - T
                     G - C
                     G + T
                     T - A
                     T - A
                     G - C
                     A - T          T A
                    T     T T T C C     A
      A A T        A      | | | | |     A
    C       C T C G       A A A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGCCCTCATAAGGTATAT
                    A   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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