The detailed information of tRNA gene sequence


Sequence ID>WENV170656404
Genome IDJTFO01013099
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 123
End posion on genome 36
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cccatccttc
tRNA gene sequence 
GGAGGGATGGCTGAGTGGTCGAAAGCACCGGTCTTGAAAACCGACGAGTCGAGAGGCTCC
CAGGGTTCGAATCCCTGTCCCTCCGCCA
Downstream region at tRNA end position 
ttttgaagga
Secondary structure (Cloverleaf model)
>WENV170656404	Ser	TGA
                   c      GCCA ttttgaagga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        A     CGAGTCGAGAGGCTCC
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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