The detailed information of tRNA gene sequence


Sequence ID>WENV170656471
Genome IDJTFO01018110
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 1269
End posion on genome 1193
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcaaccatta
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGCTAGAGCATACGGTTCATACCCGTAGTGTCACTGGTTCGAT
TCCAGTCACCGCCACCA
Downstream region at tRNA end position 
tgacttcaag
Secondary structure (Cloverleaf model)
>WENV170656471	Met	CAT
                   a      ACCA tgacttcaag
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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